bowtie demonstration

by rnnh 4 years ago

GNU/Linux ◆ xterm-256color ◆ bash 1940 views

In this video, bowtie-build is used to indexS_cere_GCF_000146045.2_R64_genomic.fna, which is a copy of the Saccharomyces cerevisiae S288C genome from RefSeq. The bowtie command is then used to align Saccharomyces cerevisiae RNAseq reads to this bowtie index.

Made for https://rnnh.github.io/bioinfo-notebook/

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