fastq-dump_to_featureCounts.sh demonstration two

by rnnh 4 years ago

GNU/Linux ◆ screen ◆ bash 1637 views

This is a video demonstration of the script fastq-dump_to_featureCounts.sh. This was done using a later version of this script than the first video demonstration.

During this demonstration, the full genome sequence and genome annotation for Saccharomyces cerevisiae S288C are used. RNA-Seq reads for Saccharomyces cerevisiae (SRR8933512) are used as the example FASTQ files in this demonstration.

Version of script used in this video: https://github.com/rnnh/bioinfo-notebook/blob/e8539ac890b8167e61e974f342a827ed68052f99/scripts/fastq-dump_to_featureCounts.sh

Made for https://rnnh.github.io/bioinfo-notebook/

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